Here is a list of all files with brief descriptions:

dc_calendar.f90
dc_log.f90
dc_test.f90
dc_types.f90
gtool_file.f90
gtool_file.h
gtool_file_f.c
gtool_file_h.f90
gtool_history.f90
gtool_netcdf.c
mod_admin_restart.f90
mod_admin_time.f90
mod_atmos_admin.f90
mod_atmos_driver.f90
mod_atmos_dyn_driver.f90
mod_atmos_dyn_vars.f90
mod_atmos_phy_ae_driver.f90
mod_atmos_phy_ae_vars.f90
mod_atmos_phy_ch_driver.f90
mod_atmos_phy_ch_vars.f90
mod_atmos_phy_cp_driver.f90
mod_atmos_phy_cp_vars.f90
mod_atmos_phy_mp_driver.f90
mod_atmos_phy_mp_vars.f90
mod_atmos_phy_rd_driver.f90
mod_atmos_phy_rd_vars.f90
mod_atmos_phy_sf_driver.f90
mod_atmos_phy_sf_vars.f90
mod_atmos_phy_tb_driver.f90
mod_atmos_phy_tb_vars.f90
mod_atmos_vars.f90
mod_cnvlanduse.f90
mod_cnvtopo.f90
mod_convert.f90
mod_copytopo.f90
mod_cpl_admin.f90
mod_cpl_driver.f90
mod_cpl_vars.f90
mod_land_admin.f90
mod_land_driver.f90
mod_land_phy_driver.f90
mod_land_vars.f90
mod_mkinit.f90
mod_mktopo.f90
mod_ocean_admin.f90
mod_ocean_driver.f90
mod_ocean_phy_driver.f90
mod_ocean_vars.f90
mod_realinput.f90
mod_realinput_grads.f90
mod_realinput_nicam.f90
mod_realinput_scale.f90
mod_realinput_wrfarw.f90
mod_rm_driver.f90
mod_rm_prep.f90
mod_urban_admin.f90
mod_urban_driver.f90
mod_urban_phy_driver.f90
mod_urban_vars.f90
mod_user.f90
scale-rm.f90
scale-rm_init.f90
scale-rm_pp.f90
scale_aetracer_kajino13.F90
scale_aetracer_none.F90
scale_atmos_dyn.F90
scale_atmos_dyn_common.F90
scale_atmos_dyn_fvm_flux.F90
scale_atmos_dyn_fvm_flux_cd2.F90
scale_atmos_dyn_fvm_flux_cd4.F90
scale_atmos_dyn_fvm_flux_cd6.F90
scale_atmos_dyn_fvm_flux_ud1.F90
scale_atmos_dyn_fvm_flux_ud3.F90
scale_atmos_dyn_fvm_flux_ud3Koren1993.F90
scale_atmos_dyn_fvm_flux_ud5.F90
scale_atmos_dyn_tinteg_large.F90
scale_atmos_dyn_tinteg_large_euler.F90
scale_atmos_dyn_tinteg_large_rk3.F90
scale_atmos_dyn_tinteg_short.F90
scale_atmos_dyn_tinteg_short_rk3.F90
scale_atmos_dyn_tinteg_short_rk4.F90
scale_atmos_dyn_tinteg_tracer.F90
scale_atmos_dyn_tinteg_tracer_euler.F90
scale_atmos_dyn_tinteg_tracer_rk3.F90
scale_atmos_dyn_tstep_large.F90
scale_atmos_dyn_tstep_large_fvm_heve.F90
scale_atmos_dyn_tstep_short.F90
scale_atmos_dyn_tstep_short_fvm_heve.F90
scale_atmos_dyn_tstep_short_fvm_hevi.F90
scale_atmos_dyn_tstep_short_fvm_hivi.F90
scale_atmos_dyn_tstep_tracer.F90
scale_atmos_dyn_tstep_tracer_fvm_heve.F90
scale_atmos_phy_ae.F90
scale_atmos_phy_ae_dummy.F90
scale_atmos_phy_ae_kajino13.F90
scale_atmos_phy_cp.F90
scale_atmos_phy_cp_kf.F90
scale_atmos_phy_mp.F90
scale_atmos_phy_mp_common.F90
scale_atmos_phy_mp_convert.F90
scale_atmos_phy_mp_dry.F90
scale_atmos_phy_mp_kessler.F90
scale_atmos_phy_mp_sdm.F90
scale_atmos_phy_mp_sn14.F90
scale_atmos_phy_mp_suzuki10.F90
scale_atmos_phy_mp_tomita08.F90
scale_atmos_phy_rd.F90
scale_atmos_phy_rd_common.F90
scale_atmos_phy_rd_mm5sw.F90
scale_atmos_phy_rd_mstrnx.F90
scale_atmos_phy_rd_profile.F90
scale_atmos_phy_sf.F90
scale_atmos_phy_sf_bulk.F90
scale_atmos_phy_sf_bulkcoef.F90
scale_atmos_phy_sf_const.F90
scale_atmos_phy_tb.F90
scale_atmos_phy_tb_common.F90
scale_atmos_phy_tb_d1980.F90
scale_atmos_phy_tb_dns.F90
scale_atmos_phy_tb_dummy.F90
scale_atmos_phy_tb_hybrid.F90
scale_atmos_phy_tb_mynn.F90
scale_atmos_phy_tb_smg.F90
scale_atmos_sub_adiabat.F90
scale_atmos_sub_bottom.F90
scale_atmos_sub_boundary.F90
scale_atmos_sub_hydrostatic.F90
scale_atmos_sub_profile.F90
scale_atmos_sub_refstate.F90
scale_atmos_sub_saturation.F90
scale_atmos_sub_solarins.F90
scale_atmos_sub_thermodyn.F90
scale_bulkflux.F90
scale_calendar.F90
scale_comm.F90
scale_const.F90
scale_debug.F90
scale_external_input.F90
scale_external_io.F90
scale_fileio.F90
scale_grid_cartesian.F90
scale_grid_index.F90
scale_grid_nest.F90
scale_grid_real.F90
scale_gridtrans.F90
scale_history.F90
scale_index.F90
scale_intepolation.F90
scale_interpolation_nest.F90
scale_land_grid.F90
scale_land_grid_index.F90
scale_land_phy.F90
scale_land_phy_matsiro.F90
scale_land_phy_slab.F90
scale_land_sfc.F90
scale_land_sfc_slab.F90
scale_landuse.F90
scale_mapproj.F90
scale_matrix.F90
scale_monitor.F90
scale_ocean_phy.F90
scale_ocean_phy_file.F90
scale_ocean_phy_slab.F90
scale_ocean_sfc.F90
scale_ocean_sfc_slab.F90
scale_precision.F90
scale_process.F90
scale_prof.F90
scale_random.F90
scale_rdma.c
scale_rm_process.F90
scale_rm_statistics.F90
scale_roughness.F90
scale_specfunc.F90
scale_stdio.F90
scale_time.F90
scale_topography.F90
scale_tracer.F90
scale_tracer_dry.F90
scale_tracer_kessler.F90
scale_tracer_sdm.F90
scale_tracer_sn14.F90
scale_tracer_suzuki10.F90
scale_tracer_tomita08.F90
scale_urban_grid.F90
scale_urban_grid_index.F90
scale_urban_phy.F90
scale_urban_phy_slc.F90
scale_vector.F90